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Introduction

Massively parallel DNA and RNA sequencing have become widely available, reducing the cost by several orders of magnitude and placing the capacity to generate gigabases to terabases of sequence data into the hands of individual investigators. These next-generation technologies have the potential to dramatically accelerate biological and biomedical research by enabling the comprehensive analysis of genomes and transcriptomes to become inexpensive, routine and widespread. The exploding volume of data has spurred the development of novel algorithmic approaches for primary analyses of sequence data in such areas as error correction, de novo genome assembly, novel transcript discovery, virus quasispecies assembly, etc. This workshop will bring together specialists to discuss the various mathematical and computational challenges presented by next-generation sequencing technologies.

Call for paper

Submission Topics

Workshop topics of interest include but are not limited to:

  • Cloud-based NGS analysis 

  • Long single molecule read analysis 

  • Cancer sequencing 

  • 3D genome architecture 

  • NGS error correction 

  • Read mapping 

  • Variant detection and genotyping 

  • Characterization of structural variants 

  • De novo genome and transcriptome assembly 

  • Haplotype assembly 

  • Genome-assisted transcriptome reconstruction 

  • Transcriptome quantification 

  • Small RNA analysis 

  • Scaffolding and genome finishing 

  • Epigenomics 

  • Metagenomics and metatranscriptomics 

  • Single cell sequencing 

  • Population genomics

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Important Date
  • Conference Date

    Oct 19

    2017

    to

    Oct 21

    2017

  • Oct 21 2017

    Registration deadline